Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-889 in B-CLL Leukemia Haslinger Cluster 45 Table contains all genes in the B-CLL Leukemia Haslinger cluster number 45. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-889 174 AFP alpha-fetoprotein [Source:HGNC Symbol;Acc:317] zzz999 5130 PCYT1A phosphate cytidylyltransferase 1, choline, alpha [Source:HGNC Symbol;Acc:8754] zzz999 1284 COL4A2 collagen, type IV, alpha 2 [Source:HGNC Symbol;Acc:2203] zzz999 5932 RBBP8 retinoblastoma binding protein 8 [Source:HGNC Symbol;Acc:9891] zzz999 7498 XDH xanthine dehydrogenase [Source:HGNC Symbol;Acc:12805] zzz999 22985 ACIN1 apoptotic chromatin condensation inducer 1 [Source:HGNC Symbol;Acc:17066] zzz999 116150 NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21042] T 1638 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) [Source:HGNC Symbol;Acc:2709] zzz999 4104 zzz999 zzz999 zzz999 26747 NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 [Source:HGNC Symbol;Acc:8057] T 7472 WNT2 wingless-type MMTV integration site family member 2 [Source:HGNC Symbol;Acc:12780] T 4052 LTBP1 latent transforming growth factor beta binding protein 1 [Source:HGNC Symbol;Acc:6714] zzz999 5534 PPP3R1 protein phosphatase 3, regulatory subunit B, alpha [Source:HGNC Symbol;Acc:9317] zzz999 100506658 OCLN occludin [Source:HGNC Symbol;Acc:8104] zzz999 8161 COIL coilin [Source:HGNC Symbol;Acc:2184] T 55837 EAPP E2F-associated phosphoprotein [Source:HGNC Symbol;Acc:19312] zzz999 8861 LDB1 LIM domain binding 1 [Source:HGNC Symbol;Acc:6532] zzz999 11236 RNF139 ring finger protein 139 [Source:HGNC Symbol;Acc:17023] T 22986 SORCS3 sortilin-related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:16699] P T 22836 RHOBTB3 Rho-related BTB domain containing 3 [Source:HGNC Symbol;Acc:18757] T 9722 NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein [Source:HGNC Symbol;Acc:16859] zzz999 5440 POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa [Source:HGNC Symbol;Acc:9198] zzz999 1490 CTGF connective tissue growth factor [Source:HGNC Symbol;Acc:2500] T 5981 RFC1 replication factor C (activator 1) 1, 145kDa [Source:HGNC Symbol;Acc:9969] zzz999 7978 MTERF mitochondrial transcription termination factor [Source:HGNC Symbol;Acc:21463] T 6447 SCG5 secretogranin V (7B2 protein) [Source:HGNC Symbol;Acc:10816] zzz999 2780 GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:HGNC Symbol;Acc:4394] zzz999 2551 GABPA GA binding protein transcription factor, alpha subunit 60kDa [Source:HGNC Symbol;Acc:4071] T 653808 ZG16 zymogen granule protein 16 homolog (rat) [Source:HGNC Symbol;Acc:30961] zzz999 5139 PDE3A phosphodiesterase 3A, cGMP-inhibited [Source:HGNC Symbol;Acc:8778] T 3109 HLA-DMB major histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:4935] zzz999 8460 TPST1 tyrosylprotein sulfotransferase 1 [Source:HGNC Symbol;Acc:12020] T 1842 ECM2 extracellular matrix protein 2, female organ and adipocyte specific [Source:HGNC Symbol;Acc:3154] T 3746 KCNC1 potassium voltage-gated channel, Shaw-related subfamily, member 1 [Source:HGNC Symbol;Acc:6233] zzz999 57035 C1orf63 chromosome 1 open reading frame 63 [Source:HGNC Symbol;Acc:25234] T 3344 FOXN2 forkhead box N2 [Source:HGNC Symbol;Acc:5281] T 9506 PAGE4 P antigen family, member 4 (prostate associated) [Source:HGNC Symbol;Acc:4108] zzz999 4015 LOX lysyl oxidase [Source:HGNC Symbol;Acc:6664] zzz999 26092 TOR1AIP1 torsin A interacting protein 1 [Source:HGNC Symbol;Acc:29456] zzz999 4016 LOXL1 lysyl oxidase-like 1 [Source:HGNC Symbol;Acc:6665] zzz999 57135 DAZ4 deleted in azoospermia 4 [Source:HGNC Symbol;Acc:15966] T 5063 PAK3 p21 protein (Cdc42/Rac)-activated kinase 3 [Source:HGNC Symbol;Acc:8592] zzz999 4625 MYH7 myosin, heavy chain 7, cardiac muscle, beta [Source:HGNC Symbol;Acc:7577] zzz999 10214 SSX3 synovial sarcoma, X breakpoint 3 [Source:HGNC Symbol;Acc:11337] T 6570 SLC18A1 solute carrier family 18 (vesicular monoamine), member 1 [Source:HGNC Symbol;Acc:10934] zzz999 2160 F11 coagulation factor XI [Source:HGNC Symbol;Acc:3529] T 7587 ZNF37A zinc finger protein 37A [Source:HGNC Symbol;Acc:13102] zzz999 368 ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 [Source:HGNC Symbol;Acc:57] zzz999 54677 CROT carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:2366] zzz999 2184 FAH fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:HGNC Symbol;Acc:3579] zzz999 4983 OPHN1 oligophrenin 1 [Source:HGNC Symbol;Acc:8148] zzz999 26058 GIGYF2 GRB10 interacting GYF protein 2 [Source:HGNC Symbol;Acc:11960] T 6059 ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69] zzz999 2182 ACSL4 acyl-CoA synthetase long-chain family member 4 [Source:HGNC Symbol;Acc:3571] T 6456 SH3GL2 SH3-domain GRB2-like 2 [Source:HGNC Symbol;Acc:10831] zzz999 22941 SHANK2 SH3 and multiple ankyrin repeat domains 2 [Source:HGNC Symbol;Acc:14295] T 4856 NOV nephroblastoma overexpressed gene [Source:HGNC Symbol;Acc:7885] zzz999 6259 RYK RYK receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:10481] zzz999 5728 PTEN phosphatase and tensin homolog [Source:HGNC Symbol;Acc:9588] P T 23047 PDS5B PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:20418] T 65243 ZNF643 zinc finger protein 643 [Source:HGNC Symbol;Acc:28053] zzz999 1555 CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6 [Source:HGNC Symbol;Acc:2615] T

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